Pre-installed R packages

Contents

The R console and Mini-apps come with a number of the most commonly used data science packages pre-installed. To get the best performance you should only ever install these specific packages manually if they explicitly require a different version to the one that is baked in.

Installing a different version of a pre-baked package

Should you require a specific package version other than what is pre-baked (see the list below), you will need to follow these installation instructions.

First, you need to check which packages are dependent on a package you want to update:

library(tools) 
dependsOnPkgs("modelr")

If the package was installed as a dependency of another package, unload the namespace of the parent package first, followed by the package you want to update:

unloadNamespace("tidyverse")
unloadNamespace("modelr")

Next, install the required package version:

devtools::install_version("modelr", "0.1.3")

Then, you can reload the package (the updated package should be loaded first followed by the parent):

library("modelr")
library("tidyverse")

Check the loaded package version:

packageVersion("modelr")

A new package version will be installed in the /home/workspace/files/R/4.0.2 folder from which the Mini-apps and the R console will pull the updated package version by default.

Unfortunately, there are a couple of pre-installed packages that cannot be unloaded because they are needed for the underlying functionality of the R console (e.g. htmltools). In that case, you can use the system command to run an installation on a fresh R console behind the scenes:

system("Rscript -e \"devtools::install_version('htmltools', '0.5.1.1')\"")

Restart any R sessions or Mini-apps to pull this newly installed package version.

If you encounter any issues installing a different package version to the one that is baked in, then please submit a Service Desk request.

List of installed R packages

The list of packages below includes both the pre-installed packages and their dependencies. Installed packages have been highlighted in bold, the rest are dependencies.

Package list	4.1.1	4.0.2	3.6.3	3.5.3	3.5.0
abind	n/a	n/a	n/a	n/a	1.4-5
acepack	n/a	n/a	n/a	n/a	1.4.1
ada	n/a	n/a	n/a	n/a	2.0-5
additivityTests	n/a	n/a	n/a	n/a	1.1-4
amap	n/a	n/a	n/a	n/a	0.8-16
AnnotationDbi	n/a	n/a	n/a	n/a	1.42.1
AnnotationFilter	n/a	n/a	n/a	n/a	1.4.0
aod	n/a	n/a	n/a	n/a	1.3
ape	n/a	n/a	n/a	n/a	5.1
arrow	5.0.0.2	1.0.1	n/a	n/a	n/a
arules	n/a	n/a	n/a	n/a	1.6-1
arulesViz	n/a	n/a	n/a	n/a	1.3-1
askpass	1.1	1.1	1.1	1.1	n/a
assertthat	0.2.1	0.2.1	0.2.1	0.2.1	0.2.1
aws.s3	n/a	n/a	n/a	n/a	0.3.12
aws.signature	n/a	n/a	n/a	n/a	0.4.1
backports	1.2.1	1.1.10	1.1.7	1.1.4	1.1.2
base	4.1.1	4.0.2	3.6.3	3.5.3	3.5.0
base64enc	0.1-3	0.1-3	0.1-3	0.1-3	0.1-3
bdsmatrix	n/a	n/a	n/a	n/a	1.3-3
BH	n/a	1.72.0-3	1.72.0-3	1.69.0-1	1.75.0-0
biclust	n/a	n/a	n/a	n/a	2.0.1
bindr	n/a	n/a	n/a	n/a	0.1.1
bindrcpp	n/a	n/a	n/a	n/a	0.2.2
Biobase	n/a	n/a	n/a	n/a	2.40.0
BiocGenerics	n/a	n/a	n/a	n/a	0.26.0
BiocManager	1.30.16	1.30.15	1.30.15	1.30.0	1.30.0
BiocVersion	3.13.1	3.12.0	3.10.1	1.30.4	n/a
BiocParallel	n/a	n/a	n/a	n/a	1.14.2
biomaRt	n/a	n/a	n/a	n/a	2.36.1
Biostrings	n/a	n/a	n/a	n/a	2.48.0
biovizBase	n/a	n/a	n/a	n/a	1.28.1
bit	4.0.4	4.0.4	1.1-15.2	1.1-14	1.1-14
bit64	4.0.5	4.0.5	0.9-7	0.9-7	0.9-7
bitops	n/a	n/a	1.0-6	1.0-6	1.0-6
blob	1.2.2	1.2.1	1.2.1	1.1.1	1.2.1
boot	1.3-28	1.3-25	1.3-24	1.3-20	1.3-20
brew	1.0-6	1.0-6	1.0-6	1.0-6	1.0-6
brio	1.1.2	n/a	n/a	n/a	1.1.1
broom	0.7.9	0.7.1	0.5.6	0.5.2	0.5.0
BSgenome	n/a	n/a	n/a	n/a	1.48.0
cachem	1.0.6	n/a	n/a	n/a	1.0.4
callr	3.7.0	3.4.4	3.4.3	3.2.0	3.5.1
caTools	n/a	n/a	1.18.0	1.17.1.2	1.17.1
cellranger	1.1.0	1.1.0	1.1.0	1.1.0	1.1.0
checkmate	n/a	n/a	n/a	n/a	1.8.5
chron	n/a	n/a	n/a	n/a	2.3-52
class	7.3-19	7.3-17	7.3-15	7.3-15	7.3-14
cli	3.0.1	2.0.2	2.0.2	1.1.0	2.3.1
clipr	0.7.1	0.7.0	0.7.0	0.6.0	0.4.1
clisymbols	n/a	n/a	1.2.0	1.2.0	n/a
cluster	2.1.2	2.1.0	2.1.0	2.0.7-1	2.0.7-1
coda	n/a	n/a	n/a	n/a	0.19-1
codetools	0.2-18	0.2-16	0.2-16	0.2-16	0.2-15
coin	n/a	n/a	n/a	n/a	1.2-2
colorspace	2.0-2	1.4-1	1.4-1	1.4-1	2.0-0
commonmark	1.7	1.7	1.7	1.7	1.7
compiler	4.1.1	4.0.2	3.6.3	3.5.3	3.5.0
covr	n/a	3.5.1	3.5.0	3.2.1	3.1.0
cpp11	0.4.0	0.2.2	n/a	n/a	n/a
crayon	1.4.1	1.3.4	1.3.4	1.3.4	1.4.1
credentials	1.3.1	1.3.0	n/a	n/a	n/a
crosstalk	n/a	1.1.0.1	1.1.0.1	n/a	1.0.0
curl	4.3.2	4.3	4.3	3.3	3.2
cyclocomp	n/a	n/a	1.1.0	n/a	n/a
DAAG	n/a	n/a	n/a	n/a	1.22
data.table	1.14.2	1.13.0	1.12.8	1.12.2	1.11.4
datasets	4.1.1	4.0.2	3.6.3	3.5.3	3.5.0
DBI	1.1.1	1.1.0	1.1.0	1.0.0	1.1.1
DBItest	n/a	n/a	n/a	n/a	1.5-2
dbplyr	2.1.1	2.1.1	2.1.1	1.4.0	2.1.0
DelayedArray	n/a	n/a	n/a	n/a	0.6.1
deldir	n/a	n/a	n/a	n/a	0.1-15
dendextend	n/a	n/a	n/a	n/a	1.8.0
DendSer	n/a	n/a	n/a	n/a	1.0.1
DEoptimR	n/a	n/a	n/a	n/a	1.0-8
desc	1.4.0	1.2.0	1.2.0	1.2.0	1.3.0
devtools	2.4.2	2.3.2	2.3.0	2.0.2	1.13.6
dichromat	n/a	n/a	n/a	n/a	2.0-0
diffobj	0.3.4	n/a	n/a	n/a	0.3.3
digest	0.6.28	0.6.25	0.6.25	0.6.18	0.6.27
diptest	n/a	n/a	n/a	n/a	0.75-7
distr	n/a	n/a	n/a	n/a	2.7.0
distrEx	n/a	n/a	n/a	n/a	2.6.1
docopt	0.7.1	0.7.1	0.6.1	0.6.1	n/a
doParallel	n/a	n/a	n/a	n/a	1.0.11
dotCall64	n/a	n/a	n/a	n/a	0.9-5.2
dplyr	1.0.7	1.0.6	1.0.6	0.8.0.1	1.0.5
DT	n/a	0.15	0.13	n/a	0.4
dtplyr	1.1.0	1.0.1	1.0.1	0.0.3	0.0.2
e1071	n/a	n/a	n/a	n/a	1.6-8
egg	n/a	n/a	n/a	n/a	0.4.0
ellipsis	0.3.2	0.3.2	0.3.2	0.3.2	0.3.1
ensembldb	n/a	n/a	n/a	n/a	2.4.1
estimability	n/a	n/a	n/a	n/a	1.3
evaluate	0.14	0.14	0.14	0.13	0.14
expm	n/a	n/a	n/a	n/a	0.999-2
fansi	0.5.0	0.4.1	0.4.1	0.4.0	0.4.2
farver	2.1.0	2.0.3	2.0.3	n/a	n/a
fastmap	1.1.0	1.0.1	1.0.1	n/a	1.1.0
fastmatch	n/a	n/a	n/a	n/a	1.1-0
feather	n/a	n/a	0.3.5	0.3.3	0.3.1
ff	n/a	n/a	n/a	n/a	2.2-14
ffbase	n/a	n/a	n/a	n/a	0.12.3
filehash	n/a	n/a	n/a	n/a	2.4-1
flexclust	n/a	n/a	n/a	n/a	1.3-5
flexmix	n/a	n/a	n/a	n/a	2.3-14
foghorn	n/a	n/a	1.2.1	1.1.0	n/a
fontawesome	0.2.2	n/a	n/a	n/a	n/a
fontBitstreamVera	n/a	n/a	n/a	n/a	0.1.1
fontLiberation	n/a	n/a	n/a	n/a	0.1.0
fontquiver	n/a	n/a	n/a	n/a	0.2.1
forcats	0.5.1	0.5.0	0.5.0	0.4.0	0.3.0
foreach	n/a	n/a	n/a	n/a	1.4.4
foreign	0.8-81	0.8-80	0.8-75	0.8-71	0.8-70
formatR	n/a	n/a	1.7	1.6	1.5
Formula	n/a	n/a	n/a	n/a	1.2-3
fpc	n/a	n/a	n/a	n/a	2.1-11
fs	1.5.0	1.5.0	1.4.1	1.2.7	1.5.0
fst	0.9.4	0.9.4	n/a	n/a	0.9.9
futile.logger	n/a	n/a	n/a	n/a	1.4.3
futile.options	n/a	n/a	n/a	n/a	1.0.1
GA	n/a	n/a	n/a	n/a	3.1.1
gargle	1.2.0	n/a	0.5.1	n/a	n/a
gbm	n/a	n/a	n/a	n/a	2.1.3
gclus	n/a	n/a	n/a	n/a	1.3.1
gdata	n/a	n/a	n/a	n/a	2.18.0
gdtools	n/a	n/a	n/a	n/a	0.1.7
gee	n/a	n/a	n/a	n/a	4.13-19
generics	0.1.0	0.0.2	0.0.2	0.0.2	0.1.0
GenomeInfoDb	n/a	n/a	n/a	n/a	1.16.0
GenomeInfoDbData	n/a	n/a	n/a	n/a	1.1.0
GenomicAlignments	n/a	n/a	n/a	n/a	1.16.0
GenomicFeatures	n/a	n/a	n/a	n/a	1.32.0
GenomicRanges	n/a	n/a	n/a	n/a	1.32.6
geosphere	n/a	n/a	n/a	n/a	1.5-7
gert	1.4.1	0.3	n/a	n/a	n/a
ggmap	n/a	n/a	n/a	n/a	2.6.1
ggplot2	3.3.5	3.3.3	3.3.3	3.3.3	3.0.0
ggplot2movies	n/a	n/a	n/a	n/a	0.0.1
ggvis	0.4.7	0.4.7	0.4.7	0.4.7	n/a
gh	1.3.0	1.1.0	1.1.0	1.0.1	n/a
git2r	n/a	0.27.1	0.27.1	0.25.2	0.23.0
gitcreds	0.1.1	n/a	n/a	n/a	n/a
glmnet	n/a	n/a	n/a	n/a	2.0-16
glue	1.4.2	1.4.2	1.4.0	1.3.1	1.4.2
gmailr	n/a	n/a	1.0.0	0.7.1	0.7.1
gmodels	n/a	n/a	n/a	n/a	2.18.1
googledrive	2.0.0	n/a	n/a	n/a	n/a
googlesheets4	1.0.0	n/a	n/a	n/a	n/a
gplots	n/a	n/a	n/a	n/a	3.0.1
graph	n/a	n/a	n/a	n/a	1.58.0
graphics	4.1.1	4.0.2	3.6.3	3.5.3	3.5.0
grDevices	4.1.1	4.0.2	3.6.3	3.5.3	3.5.0
grid	4.1.1	4.0.2	3.6.3	3.5.3	3.5.0
gridExtra	n/a	n/a	n/a	n/a	2.3
gtable	0.3.0	0.3.0	0.3.0	0.3.0	0.3.0
gtools	n/a	n/a	n/a	n/a	3.8.1
haven	2.4.3	2.3.1	2.2.0	2.1.0	1.1.2
hexbin	n/a	n/a	n/a	n/a	1.27.2
hflights	0.1	0.1	0.1	0.1	0.1
highlight	n/a	n/a	0.5.0	0.4.7.2	n/a
highr	0.9	0.8	0.8	0.8	0.8
Hmisc	n/a	n/a	n/a	n/a	4.1-1
hms	1.1.1	0.5.3	0.5.3	0.4.2	0.4.2
HSAUR	n/a	n/a	n/a	n/a	1.3-9
htmlTable	n/a	n/a	n/a	n/a	1.12
htmltools	0.5.2	0.5.0	0.4.0	0.3.6	0.5.1.1
htmlwidgets	1.5.4	1.5.2	1.5.1	1.3	1.2
httpuv	1.6.3	1.5.4	1.5.2	1.5.1	1.4.5
httr	1.4.2	1.4.2	1.4.1	1.4.0	1.3.1
hunspell	n/a	n/a	3	3	2.9
ibdreg	n/a	n/a	n/a	n/a	0.2.5
ids	1.0.1	n/a	n/a	n/a	n/a
igraph	n/a	n/a	n/a	1.2.4.1	1.2.1
igraphdata	n/a	n/a	n/a	n/a	1.0.1
ini	0.3.1	0.3.1	0.3.1	0.3.1	n/a
inline	n/a	n/a	n/a	n/a	0.3.15
IRanges	n/a	n/a	n/a	n/a	2.14.10
IRdisplay	1	1	1	0.7.0	1
IRkernel	1.2	1.1.1	1.2	1.0.0	1.1.1
isoband	0.2.5	0.2.2	0.2.1	0.2.4	n/a
iterators	n/a	n/a	n/a	n/a	1.0.10
itertools	n/a	n/a	n/a	n/a	0.1-3
jomo	n/a	n/a	n/a	n/a	2.6-3
jpeg	n/a	n/a	n/a	n/a	0.1-8
jquerylib	0.1.4	n/a	n/a	n/a	0.1.3
jsonlite	1.7.2	1.7.1	1.6.1	1.6	1.7.2
JuliaCall	n/a	n/a	n/a	n/a	0.14.0
kernlab	n/a	n/a	n/a	n/a	0.9-26
KernSmooth	2.23-20	2.23-17	2.23-16	2.23-15	2.23-15
knitr	1.36	1.33	1.33	1.22	1.31
labeling	0.4.2	0.3	0.3	0.3	0.4.2
Lahman	9.0-0	8.0-0	7.0-1	6.0-0	6.0-0
lambda.r	n/a	n/a	n/a	n/a	1.2.3
lars	n/a	n/a	n/a	n/a	1.2
later	1.3.0	1.1.0.1	1.0.0	0.8.0	1.0.0
lattice	0.20-45	0.20-41	0.20-38	0.20-38	0.20-35
latticeExtra	n/a	n/a	n/a	n/a	0.6-28
lazyeval	n/a	0.2.2	0.2.2	0.2.2	0.2.1
LearnBayes	n/a	n/a	n/a	n/a	2.15.1
lifecycle	1.0.1	1.0.0	1.0.0	1.0.0	1.0.0
lintr	n/a	n/a	2.0.1	1.0.3	1.0.2
littler	0.3.13	0.3.11	0.3.9	0.3.7	n/a
lme4	n/a	n/a	n/a	n/a	1.1-17
lmtest	n/a	n/a	n/a	n/a	0.9-36
lokern	n/a	n/a	n/a	n/a	1.1-8
lsmeans	n/a	n/a	n/a	n/a	2.27-62
lubridate	1.7.10	1.7.9	1.7.8	1.7.4	1.7.4
magrittr	2.0.1	1.5	1.5	1.5	2.0.1
manipulateWidget	n/a	n/a	n/a	n/a	0.10.0
mapproj	n/a	n/a	n/a	n/a	1.2.6
maps	n/a	n/a	n/a	n/a	3.3.0
maptools	n/a	n/a	n/a	n/a	0.9-2
markdown	n/a	1.1	1.1	0.9	1.1
MASS	7.3-54	7.3-51.6	7.3-51.5	7.3-51.1	7.3-49
Matrix	1.3-4	1.2-18	1.2-18	1.2-15	1.2-14
MatrixModels	n/a	n/a	n/a	n/a	0.4-1
matrixStats	n/a	n/a	n/a	n/a	0.54.0
maxLik	n/a	n/a	n/a	n/a	1.3-4
mclust	n/a	n/a	n/a	n/a	5.4.1
memoise	2.0.0	1.1.0	1.1.0	1.1.0	1.1.0
methods	4.1.1	4.0.2	3.6.3	3.5.3	3.5.0
mgcv	1.8-37	1.8-31	1.8-31	1.8-27	1.8-23
mice	n/a	n/a	n/a	n/a	3.3.0
microbenchmark	1.4-7	1.4-7	1.4-7	1.4-7	1.4-7
mime	0.12	0.9	0.9	0.6	0.1
miniUI	n/a	n/a	n/a	n/a	0.1.1.1
minqa	n/a	n/a	n/a	n/a	1.2.4
miscTools	n/a	n/a	n/a	n/a	0.6-22
mitml	n/a	n/a	n/a	n/a	0.3-6
mlbench	n/a	n/a	n/a	n/a	2.1-1
mockery	0.4.2	0.4.2	0.4.2	0.4.1.1	0.4.2
modelr	0.1.8	0.1.8	0.1.7	0.1.4	0.1.2
modeltools	n/a	n/a	n/a	n/a	0.2-22
mondate	n/a	n/a	n/a	n/a	0.10.01.02
multcomp	n/a	n/a	n/a	n/a	1.4-8
munsell	0.5.0	0.5.0	0.5.0	0.5.0	0.5.0
mvtnorm	n/a	n/a	n/a	n/a	1.0-8
neighbr	n/a	n/a	n/a	n/a	1
nlme	3.1-153	3.1-148	3.1-144	3.1-137	3.1-137
nloptr	n/a	n/a	n/a	n/a	1.0.4
NLP	n/a	n/a	n/a	n/a	0.1-11
nnet	7.3-16	7.3-14	7.3-12	7.3-12	7.3-12
nycflights13	1.0.2	1.0.1	1.0.1	1.0.0	1.0.0
openssl	1.4.5	1.4.3	1.4.1	1.3	1.0.1
outliers	n/a	n/a	n/a	n/a	0.14
packrat	n/a	n/a	n/a	0.5.0	n/a
pan	n/a	n/a	n/a	n/a	1.6
parallel	4.1.1	4.0.2	3.6.3	3.5.3	3.5.0
parsedate	n/a	n/a	1.2.0	1.1.3	n/a
party	n/a	n/a	n/a	n/a	1.3-0
pbdZMQ	0.3-5	0.3-3	0.3-5	0.3-3	0.3-3
PBSmapping	n/a	n/a	n/a	n/a	2.70.5
pillar	1.6.3	1.6.1	1.6.1	1.6.1	1.5.1
pingr	n/a	n/a	2.0.0	1.1.2	n/a
pinp	n/a	n/a	n/a	n/a	0.0.6
PivotalR	n/a	n/a	n/a	0.1.18.3.1	0.1.18.3
pkgbuild	1.2.0	1.1.0	1.0.8	1.0.3	1.2.0
pkgconfig	2.0.3	2.0.3	2.0.3	2.0.2	2.0.3
pkgdown	n/a	n/a	1.5.1	1.3.0	n/a
pkgKitten	n/a	n/a	n/a	n/a	0.1.4
pkgload	1.2.2	1.1.0	1.0.2	1.0.2	1.2.0
plm	n/a	n/a	n/a	n/a	1.6-6
plogr	0.2.0	0.2.0	0.2.0	0.2.0	0.2.0
plotly	n/a	n/a	n/a	n/a	4.7.1
plyr	n/a	n/a	1.8.6	1.8.4	1.8.6
pmml	n/a	n/a	n/a	n/a	1.5.5
pmmlTransformations	n/a	n/a	n/a	n/a	1.3.1
png	n/a	n/a	n/a	n/a	0.1-7
polspline	n/a	n/a	n/a	n/a	1.1.13
polyclip	n/a	n/a	n/a	n/a	1.9-0
prabclus	n/a	n/a	n/a	n/a	2.2-6
pracma	n/a	n/a	n/a	n/a	2.1.4
praise	1.0.0	1.0.0	1.0.0	1.0.0	1.0.0
prettyunits	1.1.1	1.1.1	1.1.1	1.0.2	1.1.1
processx	3.5.2	3.4.4	3.4.2	3.3.0	3.4.5
profvis	0.3.7	0.3.7	0.3.7	0.3.5	n/a
progress	1.2.2	1.2.2	1.2.2	1.2.0	1.2.0
promises	1.2.0.1	1.1.1	1.1.0	1.0.1	1.2.0.1
ProtGenerics	n/a	n/a	n/a	n/a	1.12.0
proto	n/a	n/a	n/a	n/a	1.0.0
ps	1.6.0	1.3.4	1.3.3	1.3.0	1.6.0
purrr	0.3.4	0.3.4	0.3.4	0.3.2	0.3.4
qap	n/a	n/a	n/a	n/a	0.1-1
QCGWAS	n/a	n/a	n/a	n/a	1.0-8
quadprog	n/a	n/a	n/a	n/a	1.5-5
quantmod	n/a	n/a	n/a	n/a	0.4-13
quantreg	n/a	n/a	n/a	n/a	5.36
R.methodsS3	n/a	n/a	n/a	n/a	1.7.1
R.oo	n/a	n/a	n/a	n/a	1.22.0
R.utils	n/a	n/a	n/a	n/a	2.6.0
R6	2.5.1	2.4.1	2.4.1	2.4.0	2.5.0
randomForest	n/a	n/a	n/a	n/a	4.6-14
randomForestSRC	n/a	n/a	n/a	n/a	2.6.1
rappdirs	0.3.3	n/a	0.3.1	0.3.1	0.3.3
raster	n/a	n/a	n/a	n/a	2.6-7
rbenchmark	n/a	n/a	n/a	n/a	1.0.0
RCircos	n/a	n/a	n/a	n/a	1.2.0
rcmdcheck	1.4.0	1.3.3	1.3.3	1.3.2	n/a
RColorBrewer	1.1-2	1.1-2	1.1-2	1.1-2	1.1-2
Rcpp	1.0.7	1.0.5	1.0.4	1.0.1	1.0.6
RcppArmadillo	n/a	n/a	n/a	n/a	0.8.600.0.0
RcppEigen	n/a	n/a	n/a	n/a	0.3.3.4.0
RCurl	n/a	n/a	n/a	1.95-4.12	1.95-4.11
readr	2.0.2	1.4.0	1.3.1	1.3.1	1.1.1
readxl	1.3.1	1.3.1	1.3.1	1.3.1	1.1.0
registry	n/a	n/a	n/a	n/a	0.5
rematch	1.0.1	1.0.1	1.0.1	1.0.1	1.0.1
rematch2	2.1.2	2.1.2	2.1.2	2.0.1	2.1.2
remotes	2.4.1	2.2.0	2.1.1	2.0.4	n/a
repr	1.1.3	1.1.3	1.1.3	1.0.0	1.1.3
reprex	2.0.1	0.3.0	0.3.0	0.2.1	0.2.1
reshape	n/a	n/a	n/a	n/a	0.8.7
reshape2	n/a	n/a	1.4.4	1.4.3	1.4.3
reticulate	n/a	n/a	n/a	n/a	1.9
rex	n/a	1.2.0	1.2.0	1.1.2	1.1.2
rgdal	1.5-27	1.5-23	1.5-23	1.5-23	n/a
rgl	n/a	n/a	n/a	n/a	0.99.16
RgoogleMaps	n/a	n/a	n/a	n/a	1.4.2
Rgraphviz	n/a	n/a	n/a	n/a	2.24.0
Rhtslib	1.24.0	1.22.0	1.18.1	n/a	n/a
rhub	n/a	n/a	1.1.1	1.1.1	n/a
rjson	n/a	n/a	n/a	n/a	0.2.20
RJSONIO	n/a	n/a	n/a	n/a	1.3-0
rlang	0.4.11	0.4.11	0.4.11	0.4.11	0.4.10
RMariaDB	1.1.2	1.0.10	n/a	n/a	n/a
rmarkdown	2.11	2.4	2.1	1.12	1.1
rmeta	n/a	n/a	n/a	n/a	3
rms	n/a	n/a	n/a	n/a	5.1-2
RMySQL	n/a	n/a	0.10.20	0.10.17	n/a
ROAuth	n/a	n/a	n/a	n/a	0.9.6
robustbase	n/a	n/a	n/a	n/a	0.93-1.1
ROCR	n/a	n/a	n/a	n/a	1.0-7
roxygen2	7.1.2	7.1.1	7.1.0	6.1.1	6.1.0
rpart	4.1-15	4.1-15	4.1-15	4.1-13	4.1-13
RPostgres	1.4.1	1.2.1	n/a	n/a	n/a
RPostgreSQL	0.7	0.6-2	0.6-2	0.6-2	0.6-2
rprojroot	2.0.2	1.3-2	1.3-2	1.3-2	2.0.2
Rsamtools	n/a	n/a	n/a	n/a	1.32.2
rsconnect	n/a	n/a	n/a	0.8.13	n/a
RSQLite	2.2.8	2.2.1	2.2.0	2.1.1	2.1.1
rstudioapi	0.13	0.11	0.11	0.1	0.13
rtracklayer	n/a	n/a	n/a	n/a	1.40.3
RUnit	n/a	n/a	n/a	n/a	0.4.32
rversions	2.1.1	2.0.2	2.0.1	1.1.0	1.0.3
rvest	1.0.1	0.3.6	0.3.5	0.3.3	0.3.2
S4Vectors	n/a	n/a	n/a	n/a	0.18.3
sandwich	n/a	n/a	n/a	n/a	2.4-0
sass	0.4.0	n/a	n/a	n/a	n/a
scales	1.1.1	1.1.1	1.1.1	1.0.0	0.5.0
scatterplot3d	n/a	n/a	n/a	n/a	0.3-41
SDMTools	n/a	n/a	n/a	n/a	1.1-221
selectr	0.4-2	0.4-2	0.4-2	0.4-1	0.4-1
seriation	n/a	n/a	n/a	n/a	1.2-3
sessioninfo	1.1.1	1.1.1	1.1.1	1.1.1	n/a
sfsmisc	n/a	n/a	n/a	n/a	1.1-2
shiny	1.7.1	1.5.0	1.4.0.2	1.3.2	1.1.0
shinyjs	n/a	n/a	n/a	n/a	1
showtext	n/a	n/a	n/a	n/a	0.5-1
showtextdb	n/a	n/a	n/a	n/a	2
signal	n/a	n/a	n/a	n/a	0.7-6
slam	n/a	n/a	n/a	n/a	0.1-43
snow	n/a	n/a	n/a	n/a	0.4-2
sourcetools	0.1.7	0.1.7	0.1.7	0.1.7	0.1.7
sp	1.4-5	1.4-5	1.4-5	1.4-5	1.3-1
spam	n/a	n/a	n/a	n/a	2.2-0
SparseM	n/a	n/a	n/a	n/a	1.77
spatial	7.3-14	7.3-12	7.3-11	7.3-11	7.3-11
spatstat.utils	n/a	n/a	n/a	n/a	1.8-2
spData	n/a	n/a	n/a	n/a	0.2.9.0
spdep	n/a	n/a	n/a	n/a	0.7-9
spelling	n/a	n/a	2.1	2.1	n/a
sphet	n/a	n/a	n/a	n/a	1.7
splines	4.1.1	4.0.2	3.6.3	3.5.3	3.5.0
splm	n/a	n/a	n/a	n/a	1.4-11
startupmsg	n/a	n/a	n/a	n/a	0.9.5
stats	4.1.1	4.0.2	3.6.3	3.5.3	3.5.0
stats4	4.1.1	4.0.2	3.6.3	3.5.3	3.5.0
stringdist	n/a	n/a	n/a	0.9.5.1	0.9.5.1
stringi	1.7.5	1.5.3	1.4.6	1.4.3	1.5.3
stringr	1.4.0	1.4.0	1.4.0	1.4.0	1.4.0
strucchange	n/a	n/a	n/a	n/a	1.5-1
SummarizedExperiment	n/a	n/a	n/a	n/a	1.10.1
survival	3.2-13	3.1-12	3.1-8	2.43-3	2.41-3
svglite	n/a	n/a	n/a	n/a	1.2.1
svUnit	n/a	n/a	n/a	n/a	0.7-12
SweaveListingUtils	n/a	n/a	n/a	n/a	0.7.7
sys	3.4	3.4	3.3	3.2	n/a
sysfonts	n/a	n/a	n/a	n/a	0.7.2
tables	n/a	n/a	n/a	n/a	0.8.4
tcltk	4.1.1	4.0.2	3.6.3	3.5.3	3.5.0
testit	n/a	n/a	0.11	0.9	0.8
testthat	3.1.0	2.3.2	2.3.2	2.1.1	3.0.2
TH.data	n/a	n/a	n/a	n/a	1.0-9
tibble	3.1.5	3.1.2	3.1.2	3.1.2	3.1.0
tidyr	1.1.4	1.1.2	1.0.3	0.8.3	0.8.1
tidyselect	1.1.1	1.1.0	1.1.0	0.2.5	1.1.0
tidyverse	1.3.1	1.3.0	1.3.0	1.2.1	1.2.1
tikzDevice	n/a	n/a	n/a	n/a	0.12
timeDate	n/a	n/a	n/a	n/a	3043.102
timeSeries	n/a	n/a	n/a	n/a	3042.102
tinytex	0.34	0.26	0.21	0.12	0.6
tis	n/a	n/a	n/a	n/a	1.34
tm	n/a	n/a	n/a	n/a	0.7-4
tools	4.1.1	4.0.2	3.6.3	3.5.3	3.5.0
trimcluster	n/a	n/a	n/a	n/a	0.1-2
tseries	n/a	n/a	n/a	n/a	0.10-45
TSP	n/a	n/a	n/a	n/a	1.1-6
TTR	n/a	n/a	n/a	n/a	0.23-4
twitteR	n/a	n/a	n/a	n/a	1.1.9
TxDb.Hsapiens.UCSC.hg19.knownGene	n/a	n/a	n/a	n/a	3.2.2
tzdb	0.1.2	n/a	n/a	n/a	n/a
usethis	2.0.1	1.6.3	1.6.1	1.5.0	n/a
utf8	1.2.2	1.1.4	1.1.4	1.1.4	1.1.4
utils	4.1.1	4.0.2	3.6.3	3.5.3	3.5.0
uuid	0.1-4	0.1-4	0.1-4	0.1-2	0.1-4
VariantAnnotation	n/a	n/a	n/a	n/a	1.26.1
vcd	n/a	n/a	n/a	n/a	1.4-4
vctrs	0.3.8	0.3.8	0.3.8	0.3.8	0.3.6
vdiffr	n/a	n/a	n/a	n/a	0.2.3
viridis	n/a	n/a	n/a	n/a	0.5.1
viridisLite	0.4.0	0.3.0	0.3.0	0.3.0	0.3.0
visNetwork	n/a	n/a	n/a	n/a	2.0.4
vroom	1.5.5	1.3.2	n/a	n/a	n/a
waldo	0.3.1	n/a	n/a	n/a	0.2.5
webshot	n/a	n/a	n/a	n/a	0.5.1
whisker	0.4	0.4	0.4	0.3-2	0.3-2
whoami	n/a	n/a	1.3.0	1.3.0	n/a
withr	2.4.2	2.3.0	2.2.0	2.1.2	2.4.1
wordcloud	n/a	n/a	n/a	n/a	2.5
xaputils	1	1	1	1	1
xfun	0.26	0.23	0.23	0.6	0.22
xgboost	n/a	n/a	n/a	n/a	0.71.2
XML	n/a	n/a	3.99-0.3	3.98-1.19	3.98-1.12
xml2	1.3.2	1.3.2	1.3.2	1.2.0	1.2.0
lparsedata	n/a	n/a	1.0.3	n/a	n/a
xopen	1.0.0	1.0.0	1.0.0	1.0.0	n/a
xtable	1.8-4	1.8-4	1.8-4	1.8-4	1.8-4
xts	n/a	n/a	n/a	n/a	0.11-0
XVector	n/a	n/a	n/a	n/a	0.20.0
yaml	2.2.1	2.2.1	2.2.1	2.2.0	2.2.1
zip	2.2.0	n/a	n/a	n/a	n/a
zlibbioc	1.38.0	1.36.0	1.32.0	n/a	1.26.0
zoo	n/a	n/a	n/a	n/a	1.8-3

Updated on March 22, 2022

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