Uploading & Importing Data – Aridhia DRE Workspaces Knowledge Base

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Uploading & Importing Data

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FAIR Data Services

FAIR Data Principles

FAIR Data Services Overview

Using FAIR Data Services

Viewing Release Information

Customising the Layout

Navigating in FAIR

Discovering Data

Discovering Data

Saving, Sharing and Deleting a Search

Searching for Data

Dataset Visibility

Editing a Dataset

Deleting a Dataset

Creating a Dataset

What is a Dataset?

Custom DAR Forms

Data Access Requests (DAR)

Reviewing a Data Access Request

Viewing a Data Access Request

Requesting Access to Data

Service Vocabulary API

Administering FAIR

User Approval and Disapproval

Role Management

Configuring Service Vocabularies

Theme Management

User Signup and Management

FAIR Permissions

FAIR Permission Model

Role-based Access Control

Registering for a FAIR Account

Workspace Basics

Workspace principles

Browser support for Workspaces

Navigating your workspace

About your workspace

Logging into Workspaces

Registering for a Workspaces account

Using two-factor authentication to access Workspaces

Logging in and out of Workspaces

Resetting your Workspaces password

The Tenant Administrator role

The Contributor role

The Workspace Administrator role

The Standard User role

Role-based access control

Using Blob storage

Unzipping your zipped folders

Moving and copying files

Understanding the workspace file storage

Using the SQL Editor

Creating and deleting files

Creating and deleting folders

Navigating the Files tab

Adding metadata to datasets

Creating datasets

Using the Data Table Editor

Exporting a dataset

Navigating the Datasets tab

Creating a custom view

Creating a rapid visualisation

Uploading files via the workspace

Uploading files via an API

Inbound Airlock and Inbox

Guidance for uploading files

Downloading or copying approved files

Responding to an Airlock download request

Submitting an Airlock download request

Pre-installed R packages

Reading and writing data in R

Installing R packages

Using the R Console

How to upload your Mini-app

Customising an existing Mini-app

Navigating the Mini-apps tab

Creating a Mini-app from a template

About Mini-apps

Jupyter Notebooks

Using your Jupyter Notebook app

Creating and deleting Jupyter Notebook apps

Virtual Desktops

Using Virtual Desktops

Changing screen resolution of a Linux VM

Keeping your VM up to date

First-time Virtual Desktop setup

Virtual Desktop whitelist

Using Virtual Desktops

Accessing your Virtual Desktop

Installing software on Virtual Desktops

Using MLflow R API in your Virtual Desktop

Installing database GUIs on your Virtual Desktop

Installing text editors on your Virtual Desktop

Installing Docker on your Virtual Desktop

Setting up GitLab on your Virtual Desktop

Installing LibreOffice on your Virtual Desktop

Installing RStudio on your Virtual Desktop

Installing PLINK on your Virtual Desktop

Installing Anaconda and running Jupyter Notebooks on your Virtual Dekstop

Installing R on your Virtual Desktop

Data Table Analytics

Using Data Table Analytics

Using the Data Table Analytics module

Data visualisation

Box and whisker plot

Column bar chart

Frequency bar chart

Descriptive statistics

Cross tabulation

Statistical testing

Pearson's chi-squared test

Mann–Whitney U test

Student's T-test

Statistical modelling

Logistic Regression

Linear Regression

Analysis of variance (ANOVA)

Other Tools & Features

Collaborating in the workspace

Adding, viewing and editing notes and insights

Generating reports

Publishing PDFs in a Workspace VM

Generating reports from your research outputs

Capturing a snapshot of a workspace

Workspace Administration

Using Workspaces as an Administrator

Customising your workspace

Using the Audit tab to monitor workspace activity

Inviting users to your workspace and assigning roles

Using Workspaces as a Tenant Administrator

Editing or deleting an existing workspace

Adding a workspace

Workspaces Release Notes

FAIR Data Services

Aridhia Dataset Library

Aridhia Data Selection

Aridhia De-Identification Service

New Workspace Terms and Conditions

Workspace VM Patching Policy

Sample Data Processing Agreement

Aridhia DRE fair usage policy

Aridhia DRE privacy policy

Aridhia DRE terms and conditions

Training & Demos

Aridhia's Shiny Apps

Training courses

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